PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010278-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 306aa    MW: 33665.3 Da    PI: 5.778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010278-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.2e-055883126
                   CHHHHHHHHHHHHHHHHHHHHHHHCT CS
            HLH  1 rrrahnerErrRRdriNsafeeLrel 26
                   r++ +  rE+ RRdr+N+ f eL   
  NNU_010278-RA 58 RKVQKADREKLRRDRLNEQFLELGHA 83
                   5677889***************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.88657122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDQWKPEGFC QSVPADLAVT DFQQSSADLC VPSNRLQSSQ PDSSQRAEVE VKDSVAARKV  60
QKADREKLRR DRLNEQFLEL GHALELGLQL DLVGQEKNEL REEKASLKSD IENLNIQYQQ  120
RLRVMFPWAA MDPSVVMAPP SYPYAMPVPV PPGPIPMHPS LQPFPFFRNQ NPGAIPNHCS  180
TFIPYSSPAN PQGEQPSTQY VPPNVQPSNR SHTSSKQDSK SKSLDRQRGC NIEKSDDSND  240
VATELELKTP GSAADQELSS GQRKGKQSQR KENSVVDGSC SSRCSSSKVA QDSSSNSVGD  300
GPKADN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261279.10.0PREDICTED: transcription factor bHLH121
SwissprotQ9LT237e-52BH121_ARATH; Transcription factor bHLH121
TrEMBLM5WH391e-109M5WH39_PRUPE; Uncharacterized protein
STRINGVIT_04s0023g03430.t011e-101(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.25e-42bHLH family protein